Information for 4-GCCTCHCTTGAVT (Motif 14)

A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
Reverse Opposite:
C T G A A C G T C G A T A G T C C G T A C G T A A C T G C T G A A C T G C G T A A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 23.0bp
Average Position of motif in Background60.0 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCTCHCTTGAVT
-CCTCACCTG---
 A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCTCHCTTGAVT
---CCACTTGAA-
 A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCTCHCTTGAVT
--ACCACTTGAA-
 A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCCTCHCTTGAVT-----
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCHCTTGAVT
TGWCCTCARNTGACC
 A C G T A C G T A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCTCHCTTGAVT-
--GTCACGTGACYV
 A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCTCHCTTGAVT
---NCACGTGACN
 A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCTCHCTTGAVT---
CGTCACGCATGACTGCA
 A C G T A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCTCHCTTGAVT
CCGGTCACGTGA--
 A C G T A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCTCHCTTGAVT---
CGTCACGCATGACTGCA
 A C G T A C T G A G T C A G T C C G A T A G T C G A C T A G T C A C G T A C G T A C T G G C T A T C G A A G C T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A