Information for 12-AGYCAGTTKTCATYTT (Motif 13)

C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
Reverse Opposite:
T G C A C G T A C T A G C G T A G C A T A C T G G T C A G T A C C G T A T G C A A G T C C G A T C T A G C T G A A T G C A G C T
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.8 +/- 17.4bp
Average Position of motif in Background41.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGYCAGTTKTCATYTT-
NNNCAGCTGTCAATATN
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
TGACAGGTGTCA----
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
TGACAGGTGTCA----
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
TGACAGCTGTCA----
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
TGACAGCTGTCA----
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGYCAGTTKTCATYTT
TGGCAGTTGN------
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
-------TGTCANYT-
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGYCAGTTKTCATYTT
------YTGWCADY--
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGYCAGTTKTCATYTT
GKVTCADRTTWC-----
 A C G T C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AGYCAGTTKTCATYTT
------NTGTCAN---
 C T G A T A C G A G C T A G T C C G T A C T A G A C G T A C G T A C T G A C G T A G T C C G T A C G A T A G C T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T