Information for 7-GCCGTGCTGC (Motif 9)

A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C
Reverse Opposite:
A C T G A G T C C T G A A T C G A T G C T G C A A G T C A T C G A T C G T A G C
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.708
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.50%
Number of Background Sequences with motif692.5
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets49.8 +/- 26.9bp
Average Position of motif in Background50.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCGTGCTGC-
-CNGTCCTCCC
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGCTGC----
TCNCCTGCTGNGNNN
 A C G T A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCCGTGCTGC-
-----GCTGTG
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGCTGC----
TNTCCTGCTGTGNNG
 A C G T A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCGTGCTGC----
NNTCCTGCTGTGNNN
 A C G T A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCCGTGCTGC-
-----GCTTCC
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCGTGCTGC--
--CCTGCTGAGH
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCGTGCTGC
----NGCTN-
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCGTGCTGC-
-CGCAGCTGCG
 A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTGCTGC--
TTGGCATGGTGCCA
 A C G T A C G T A T C G T A G C T A G C T C A G A C G T A T C G A T G C A G C T A C T G A G T C A C G T A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A