Information for 5-AGCTTCACTG (Motif 6)

C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G
Reverse Opposite:
A T G C C T G A A C T G C G A T A T C G G C T A T G C A T A C G A G T C G A C T
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.823
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif235.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets36.9 +/- 21.4bp
Average Position of motif in Background50.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCTTCACTG
-GCTTCC---
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCTTCACTG-------
AATCGCACTGCATTCCG
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCTTCACTG
CAAGCTT-----
 A C G T A C G T C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGCTTCACTG-
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTTCACTG-----
NANTTCATTGAATTA
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGCTTCACTG------
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCTTCACTG--
ACTTTCACTTTC
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCTTCACTG-------
-CAATCACTGGCAGAAT
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCTTCACTG--
ASTTTCACTTCC
 C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T A C G T
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AGCTTCACTG-
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T G C A C G T C G A T A T G C C G T A G T A C G A C T A T C G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C