Information for 3-ACCGTGGYCCCTGCTG (Motif 4)

G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C G T C A A C T G A G T C G T C A C A T G C T A G A C T G T C G A T A G C A G T C G T C A A T G C C T A G A C T G A C G T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.9 +/- 29.3bp
Average Position of motif in Background67.9 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACCGTGGYCCCTGCTG---
----GGCCYCCTGCTGDGH
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG--
------CCCCCTGCTGTG
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:9
Orientation:forward strand
Alignment:ACCGTGGYCCCTGCTG---
---------CCTGCTGAGH
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG-----
------TCNCCTGCTGNGNNN
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:11
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG
-----------NGCTN
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG-----
------TNTCCTGCTGTGNNG
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG-----
------NNTCCTGCTGTGNNN
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACCGTGGYCCCTGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACCGTGGYCCCTGCTG
---CTGTTCCTGG---
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ACCGTGGYCCCTGCTG--
----GACCCCCCGCTGTG
 G T C A A G T C A G T C T A C G A C G T A C T G A C T G A G C T A G T C A G T C G T A C A C G T A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G