Information for 9-CTGGCCAGAA (Motif 15)

G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A
Reverse Opposite:
A G C T A C G T A G T C G C A T A C T G A C T G G T A C A G T C C T G A A C T G
p-value:1e-7
log p-value:-1.842e+01
Information Content per bp:1.839
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif247.5
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets56.5 +/- 27.2bp
Average Position of motif in Background51.3 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGAA
CWGGCGGGAA
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCAGAA
WDNCTGGGCA---
 A C G T A C G T A C G T G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCAGAA-
TCTCGCGAGAAT
 A C G T G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGAA---
-TGGCGGGAAAHB
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGAA
TTGGCA----
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCAGAA
NTTGGCANN--
 A C G T G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTGGCCAGAA-
GGNTCTCGCGAGAAC
 A C G T A C G T A C G T A C G T G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGGCCAGAA--
--GGCGGGAAAH
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGGCCAGAA--
--GGCGGGAARN
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGAA-
-ATGCCAGACN
 G T A C A G C T A C T G A C T G T G A C G T A C C G T A C T A G T G C A T C G A A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C