Information for 7-CTCTTGGCACTGT (Motif 8)

A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
Reverse Opposite:
C G T A A T G C C G T A A C T G A C G T A C T G A G T C A G T C C G T A C T G A A C T G C G T A A T C G
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.928
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 15.7bp
Average Position of motif in Background55.2 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
-NNTTGGCANN--
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
--NTTGGCANN--
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
--CTTGGCAA---
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCTTGGCACTGT
---TTGGCA----
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
-GGTTGGCAT---
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
-NGTGGGCAT---
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTTGGCACTGT-----
--CTTGGCANNNTGCCAA
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTTGGCACTGT
TTCTTGGAAAN--
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTGGCACTGT---
NNNNTTGGCGCCGANNN
 A C G T A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCTTGGCACTGT----
---TTGGCATGGTGCCA
 A T G C A C G T A G T C A G C T A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A