Information for 4-CCATTACACC (Motif 14)

A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C
Reverse Opposite:
A C T G A C T G C A G T C A T G A C G T T C G A C G T A A C G T A T C G T A C G
p-value:1e-4
log p-value:-1.113e+01
Information Content per bp:1.734
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif291.2
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets27.9 +/- 23.1bp
Average Position of motif in Background48.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCATTACACC
YCATTAMC--
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCATTACACC-----
ATAAATGACACCTATCA
 A C G T A C G T A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCATTACACC
GCAATTAG---
 A C G T A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCATTACACC
GGCCATTAAC--
 A C G T A C G T A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCATTACACC
CCAATTAA---
 A C G T A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CCATTACACC-
---TCACACCT
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCATTACACC--
-CTTCACACCTA
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCATTACACC-
---TCACACCT
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCATTACACC-
---TCACACCT
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCATTACACC-
---TCACACCT
 A T G C T A G C G T C A A C G T A G C T C G T A G T A C G T C A G T A C G T A C A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T