Information for 1-TATTTGACTACCT (Motif 2)

A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A C T G A A C G T G T C A
p-value:1e-10
log p-value:-2.320e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 30.2bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGACTACCT--
NAATTTTATTACCTNN
 A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGACTACCT-
TNAATTTTATTACCTN
 A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TATTTGACTACCT
TAATTGATTA---
 A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TATTTGACTACCT
CCATAATTAATTACA-
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATTTGACTACCT
-NTTTTACGACC-
 A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGACTACCT--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGACTACCT--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATTTGACTACCT
-ATTTGAATT---
 A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATTTGACTACCT--
NNNTTTTACGACNTTN
 A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATTTGACTACCT--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C T G C G T A G T A C A C G T G T C A A G T C A G T C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A