Information for 1-GGGGAAAGGT (Motif 6)

A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T
Reverse Opposite:
G T C A G T A C A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.84%
Number of Background Sequences with motif107.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets48.8 +/- 32.5bp
Average Position of motif in Background47.3 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAGGT
TGGGGA-----
 A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAAGGT--
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAGGT--
TAGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAAAGGT--
TGGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGGAAAGGT--
ANGNAAAGGTCA
 A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGGAAAGGT----
GGAGAAAGGTGCGA
 A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAGGT-
TGGGGAAGGGCM
 A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAAGGT--
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAGGT
AGAGGAA----
 A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAAAGGT
CSTGGGAAAD--
 A C G T A C G T A C T G A C T G A C T G A C T G C G T A G T C A C G T A C T A G A C T G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T