Information for 2-AAGAGCAGCTGGGTCT (Motif 2)

C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
Reverse Opposite:
T C G A T A C G C T G A T A G C G T A C A T G C C G T A A T C G G A T C C G A T A T C G A G T C A C G T A G T C C G A T G A C T
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.657
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.6 +/- 9.6bp
Average Position of motif in Background53.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
---CGCAGCTGCG---
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
----GCAGCTGTNN--
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
--CAGCAGCTGN----
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
---AGCAGCTGCT---
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
-NNAGCAGCTGCT---
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGAGCAGCTGGGTCT
--NAACAGCTGG----
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
---NVCAGCTGBBNN-
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
NGNGACAGCTGCN---
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGCAGCTGGGTCT
NNNNAGCAGCTGCTGAN
 A C G T C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGAGCAGCTGGGTCT
--NAACAGCTGT----
 C T G A C G T A C T A G T C G A A C T G T A G C C G T A C T A G A T G C A C G T A T C G A C T G A C T G A G C T A T G C A C G T
A C G T A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T