Information for 4-AAMCMCACASYRACYA (Motif 5)

C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G A C T G A C G T A G C T C T G A A T C G A C G T C T A G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.848
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 28.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAMCMCACASYRACYA
AAACCACANN-------
 A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAMCMCACASYRACYA
AAACCACAGAN------
 A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAMCMCACASYRACYA
NWAACCACADNN------
 A C G T A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAMCMCACASYRACYA
AAACCGCAAA-------
 A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAMCMCACASYRACYA
NAAACCACAG--------
 A C G T A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAMCMCACASYRACYA
AGCGGCACACACGCAA--
 A C G T A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAMCMCACASYRACYA
AAACCACAGC-------
 A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAMCMCACASYRACYA-
--CCGCATAGCAACGGA
 C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAMCMCACASYRACYA
AAACCGCAA--------
 A C G T C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AAMCMCACASYRACYA------
--CCCCAAACCACCCCCCCCCA
 C G T A C G T A T G C A A G T C G T C A A G T C C G T A A G T C C G T A A T G C A G C T C T G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C