Information for 6-CTGGACAAGGGTG (Motif 9)

A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A G T C A G T C C T G A A C T G
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 23.4bp
Average Position of motif in Background44.0 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTGGACAAGGGTG-
NNAGGGACAAGGGCNC
 A C G T A C G T A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGGACAAGGGTG
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGACAAGGGTG
-GGAACAAAGR--
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTGGACAAGGGTG
-VRRACAAWGG--
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGGACAAGGGTG-----
--CTACTAGGATGTNNTN
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGGACAAGGGTG
-AAAACAATGG--
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTGGACAAGGGTG
--RAACAATGGN-
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGGACAAGGGTG
-AGGTCAAGGTCA
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGGACAAGGGTG-----
-------TGGGTGTGGCN
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

POL002.1_INR/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGGACAAGGGTG-
------NNNANTGA
 A G T C A G C T A C T G A C T G T G C A A G T C T G C A C G T A A C T G A C T G T A C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A