Information for 5-AAGGACAGGACCAKGT (Motif 7)

G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
Reverse Opposite:
C T G A A G T C G T C A A G C T A T C G T A C G C G A T A G T C A G T C A C G T A C T G A G C T A T G C A T G C G A C T A C G T
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.718
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets40.8 +/- 22.3bp
Average Position of motif in Background50.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGGACAGGACCAKGT
--GGGCGGGACC----
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGGACAGGACCAKGT
---CACAGN-------
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGGACAGGACCAKGT
CAAGGHCANV-------
 A C G T G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGACAGGACCAKGT
--SDGCAGGTGCNS--
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGGACAGGACCAKGT
---GACAGGTGTN---
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGGACAGGACCAKGT
CAAAGGTCAG--------
 A C G T A C G T G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGGACAGGACCAKGT
---AACAGGTGT----
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAGGACAGGACCAKGT
----VCAGGTRDRY--
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGACAGGACCAKGT---
-RGGTCADNNAGAGGTCAV
 G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T A C G T A C G T A C G T
A C G T C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGGACAGGACCAKGT
TRAGGTCA---------
 A C G T G T C A C T G A A T C G A T C G T C G A G T A C C G T A A C T G A C T G G C T A A T G C A T G C C T G A A C G T T A C G A G C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T