Information for 4-GCCAGCCTCTGTGTGC (Motif 6)

C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C G C T A G T A C C G T A A T G C C G T A T A C G C G T A A T C G A T C G A G T C C G A T A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.799
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.4 +/- 26.3bp
Average Position of motif in Background70.4 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC----
----NNGCGTGTGTGCNGCN
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC----
----NNNNTTGTGTGCTTNN
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC-
--NNNCCATTGTGTNAN
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCAGCCTCTGTGTGC----
-----CCATTGTATGCAAAT
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC-------
------NTNTATGTGCACATNNN
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC--------
-------NSTGTTTRCWCAGBNNN
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCAGCCTCTGTGTGC-----
-----GGGCCGTGTGCAAAAA
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCCAGCCTCTGTGTGC--
--------TTGCGTGCVA
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCAGCCTCTGTGTGC
-----CCTTTGTT---
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCAGCCTCTGTGTGC
-----CCWTTGTYYB-
 C T A G T G A C G T A C C G T A A C T G A T G C T A G C C G A T A T G C A C G T A T C G A C G T A C T G C G A T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T