Information for 17-TCACTGTGGCAGG (Motif 24)

A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A G T C G C T A A G T C C T G A A C T G A C G T A C T G G T C A
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 28.3bp
Average Position of motif in Background39.1 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCACTGTGGCAGG
GTAGGTCACTGGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCACTGTGGCAGG-----
-NAGANTGGCGGGGNGNA
 A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCACTGTGGCAGG---
----TGGGGAAGGGCM
 A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCACTGTGGCAGG
-----TTGCCAAG
 A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCACTGTGGCAGG
ATGCCCTGAGGC---
 A C G T A C G T A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCACTGTGGCAGG-----
------SDGCAGGTGCNS
 A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCACTGTGGCAGG
TGCCCCAGGGCA--
 A C G T A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCACTGTGGCAGG
TGCCCCCGGGCA--
 A C G T A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCACTGTGGCAGG
WTGSCCTSAGGS---
 A C G T A C G T A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TCACTGTGGCAGG---
-------AACAGGTGT
 A C G T A G T C G T C A A G T C A G C T A C T G C G A T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T