Information for 9-CWCAGGGACA (Motif 22)

A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
Reverse Opposite:
A G C T A C T G G A C T A T G C A G T C G A T C G A C T A T C G C G A T T A C G
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.510
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif595.1
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets50.3 +/- 25.7bp
Average Position of motif in Background50.6 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CWCAGGGACA-
-CCAGGAACAG
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CWCAGGGACA
TCCCCTGGGGAC
 A C G T A C G T A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CWCAGGGACA
--TGGGGA--
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CWCAGGGACA--
--CAAGGHCANV
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CWCAGGGACA
NTCAAGGTCA
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CWCAGGGACA
BTCAAGGTCA
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CWCAGGGACA
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CWCAGGGACA
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CWCAGGGACA
CACAGN----
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CWCAGGGACA-
TTCTTGGAAAN
 A T G C G C T A T A G C C T G A C T A G T C A G T A C G C T G A T G A C T C G A A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T