Information for 15-AAAGATGGCGGTG (Motif 19)

C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C A G T C C T A G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A G C T
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 25.7bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAAGATGGCGGTG
CAAGATGGCGGC-
 C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAGATGGCGGTG
CAAGATGGCGGC-
 C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAAGATGGCGGTG
--TAATGGCGGNC
 C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAGATGGCGGTG
AACAGATGGC----
 A C G T C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAGATGGCGGTG----
NAGANTGGCGGGGNGNA
 C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAGATGGCGGTG
AACAGATGGT----
 A C G T C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAGATGGCGGTG
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGATGGCGGTG-
--RGKGGGCGGAGC
 C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAGATGGCGGTG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAAGATGGCGGTG
AACAKATGGY----
 A C G T C T G A C G T A C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C T G A G C T A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T