p-value: | 1e-8 |
log p-value: | -1.988e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 0.97% |
Number of Background Sequences with motif | 24.2 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 45.2 +/- 25.1bp |
Average Position of motif in Background | 44.1 +/- 22.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.83 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGTTATGGCAA GGTTGCCATGGCAA |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGTTATGGCAA NGTTGCCATGGCAA |
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RFX5/MA0510.2/Jaspar
Match Rank: | 3 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGTTATGGCAA-- CGTTGCCATGGCAACG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 4 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGTTATGGCAA-- CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 5 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGTTATGGCAA-- CGTTGCCATGGCAACN |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 6 |
Score: | 0.77 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGTTATGGCAA- KGTTGCCATGGCAAC |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 7 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTTGTTATGGCAA- CGGTTGCCATGGCAAC |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTTGTTATGGCAA- GTTGCCATGGNAAC |
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RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGTTATGGCAA-- CGTTGCCATGGCAACG |
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NFAT5/MA0606.1/Jaspar
Match Rank: | 10 |
Score: | 0.69 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTTGTTATGGCAA-- -----NATGGAAAAN |
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