Information for 6-GAAGCAAGCC (Motif 12)

T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
Reverse Opposite:
C T A G T A C G A T G C A G C T A C G T A T C G A G T C C G A T C A G T A G T C
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.652
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif12.57%
Number of Background Sequences with motif3199.8
Percentage of Background Sequences with motif6.87%
Average Position of motif in Targets49.5 +/- 27.2bp
Average Position of motif in Background50.8 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCAAGCC
NGAAGC-----
 A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAGCAAGCC
--AGCGCGCC
 T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGCAAGCC-
AAGGCAAGTGT
 T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAAGCAAGCC
GGATGATGCAATA-
 A C G T A C G T A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAGCAAGCC
MTGATGCAAT--
 A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAGCAAGCC
NATGTTGCAA---
 A C G T A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCAAGCC
ATGATGCAAT--
 A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCAAGCC--
TGGCAGNCTGCCAG
 A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C A C G T A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAAGCAAGCC
-----CAGCC
 T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAAGCAAGCC----
ACTATGCCAACCTACC
 A C G T A C G T T C A G G T C A G C T A T C A G T A G C T G C A T C G A T A C G A T G C G A T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C