Information for 7-CGGYAACTGCAGG (Motif 10)

G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G
Reverse Opposite:
A G T C G T A C A C G T A C T G A T G C C T G A A T C G G C A T C A G T T C G A A T G C G T A C C A T G
p-value:1e-9
log p-value:-2.227e+01
Information Content per bp:1.660
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.8 +/- 14.5bp
Average Position of motif in Background34.2 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGGYAACTGCAGG---
----CACAGCAGGGGG
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGGYAACTGCAGG
---DCTCAGCAGG
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGGYAACTGCAGG-----
---DCHCAGCAGGRGGCC
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGYAACTGCAGG
SNGCACCTGCHS-
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGYAACTGCAGG---
-GAGCACAGCAGGACA
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGYAACTGCAGG---
-CCACACAGCAGGAGA
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGYAACTGCAGG---
AATCGCACTGCATTCCG
 A C G T G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGYAACTGCAGG
---NAACAGCTGG
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G
A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGYAACTGCAGG---
-CCACACAGCAGGAGA
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGYAACTGCAGG
---YAACBGCC--
 G T A C C A T G A T C G A G C T G T C A C G T A A T G C G A C T A T C G G T A C G T C A C A T G T C A G
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T