Information for 3-AACTTGGCTTCCTSCC (Motif 8)

C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
Reverse Opposite:
C T A G A C T G A T G C C G T A A C T G C T A G T C G A C G T A A T C G G T A C A G T C C T G A C T G A A C T G A G C T C G A T
p-value:1e-15
log p-value:-3.650e+01
Information Content per bp:1.773
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 28.6bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AACTTGGCTTCCTSCC-
---TTGGCATGGTGCCA
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AACTTGGCTTCCTSCC-
---CTGGCAGNCTGCCA
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AACTTGGCTTCCTSCC--
--CTTGGCANNNTGCCAA
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AACTTGGCTTCCTSCC
NNACTTGCCTT------
 A C G T C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AACTTGGCTTCCTSCC
------GGTCCCGCCC
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AACTTGGCTTCCTSCC
----NNAYTTCCTGHN
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AACTTGGCTTCCTSCC
-----CACTTCCTGT-
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AACTTGGCTTCCTSCC
------GCTTCC----
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AACTTGGCTTCCTSCC
------ACTTCCTGBT
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AACTTGGCTTCCTSCC--
--------TTCCCGCCWG
 C G T A T C G A G T A C A G C T A G C T C T A G A C T G A T G C A C G T A C G T A G T C A G T C C G A T T A C G G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G