Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-114 | -2.638e+02 | 0.0000 | 117.0 | 12.93% | 263.5 | 0.57% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-75 | -1.747e+02 | 0.0000 | 114.0 | 12.60% | 551.7 | 1.20% | motif file (matrix) |
svg |
3 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-19 | -4.552e+01 | 0.0000 | 18.0 | 1.99% | 32.5 | 0.07% | motif file (matrix) |
svg |
4 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-18 | -4.220e+01 | 0.0000 | 198.0 | 21.88% | 5292.9 | 11.48% | motif file (matrix) |
svg |
5 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-14 | -3.361e+01 | 0.0000 | 176.0 | 19.45% | 4886.3 | 10.60% | motif file (matrix) |
svg |
6 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-14 | -3.278e+01 | 0.0000 | 116.0 | 12.82% | 2707.7 | 5.87% | motif file (matrix) |
svg |
7 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-12 | -2.848e+01 | 0.0000 | 143.0 | 15.80% | 3891.5 | 8.44% | motif file (matrix) |
svg |
8 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.584e+01 | 0.0000 | 82.0 | 9.06% | 1814.5 | 3.93% | motif file (matrix) |
svg |
9 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-9 | -2.148e+01 | 0.0000 | 54.0 | 5.97% | 1057.1 | 2.29% | motif file (matrix) |
svg |
10 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.107e+01 | 0.0000 | 59.0 | 6.52% | 1228.7 | 2.66% | motif file (matrix) |
svg |
11 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-8 | -2.020e+01 | 0.0000 | 113.0 | 12.49% | 3200.4 | 6.94% | motif file (matrix) |
svg |
12 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.959e+01 | 0.0000 | 75.0 | 8.29% | 1825.9 | 3.96% | motif file (matrix) |
svg |
13 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -1.866e+01 | 0.0000 | 43.0 | 4.75% | 804.7 | 1.75% | motif file (matrix) |
svg |
14 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-8 | -1.851e+01 | 0.0000 | 26.0 | 2.87% | 340.3 | 0.74% | motif file (matrix) |
svg |
15 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-7 | -1.745e+01 | 0.0000 | 182.0 | 20.11% | 6232.3 | 13.52% | motif file (matrix) |
svg |
16 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 267.0 | 29.50% | 10045.6 | 21.78% | motif file (matrix) |
svg |
17 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.599e+01 | 0.0000 | 221.0 | 24.42% | 8087.3 | 17.54% | motif file (matrix) |
svg |
18 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.573e+01 | 0.0000 | 18.0 | 1.99% | 199.0 | 0.43% | motif file (matrix) |
svg |
19 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 37.0 | 4.09% | 727.7 | 1.58% | motif file (matrix) |
svg |
20 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.372e+01 | 0.0000 | 232.0 | 25.64% | 8835.6 | 19.16% | motif file (matrix) |
svg |
21 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-5 | -1.351e+01 | 0.0000 | 15.0 | 1.66% | 163.5 | 0.35% | motif file (matrix) |
svg |
22 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.306e+01 | 0.0000 | 44.0 | 4.86% | 1027.3 | 2.23% | motif file (matrix) |
svg |
23 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.182e+01 | 0.0001 | 69.0 | 7.62% | 2007.2 | 4.35% | motif file (matrix) |
svg |
24 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-5 | -1.156e+01 | 0.0001 | 109.0 | 12.04% | 3644.1 | 7.90% | motif file (matrix) |
svg |
25 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-4 | -1.142e+01 | 0.0002 | 130.0 | 14.36% | 4549.4 | 9.87% | motif file (matrix) |
svg |
26 |
| Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.140e+01 | 0.0002 | 40.0 | 4.42% | 959.1 | 2.08% | motif file (matrix) |
svg |
27 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.136e+01 | 0.0002 | 399.0 | 44.09% | 17140.5 | 37.17% | motif file (matrix) |
svg |
28 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.069e+01 | 0.0003 | 119.0 | 13.15% | 4147.4 | 8.99% | motif file (matrix) |
svg |
29 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.038e+01 | 0.0004 | 14.0 | 1.55% | 188.2 | 0.41% | motif file (matrix) |
svg |
30 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -9.677e+00 | 0.0008 | 55.0 | 6.08% | 1600.9 | 3.47% | motif file (matrix) |
svg |
31 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.254e+00 | 0.0011 | 43.0 | 4.75% | 1170.1 | 2.54% | motif file (matrix) |
svg |
32 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-3 | -8.795e+00 | 0.0017 | 109.0 | 12.04% | 3906.6 | 8.47% | motif file (matrix) |
svg |
33 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.778e+00 | 0.0017 | 78.0 | 8.62% | 2590.1 | 5.62% | motif file (matrix) |
svg |
34 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.574e+00 | 0.0020 | 45.0 | 4.97% | 1284.8 | 2.79% | motif file (matrix) |
svg |
35 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.519e+00 | 0.0021 | 7.0 | 0.77% | 59.9 | 0.13% | motif file (matrix) |
svg |
36 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.335e+00 | 0.0024 | 109.0 | 12.04% | 3955.3 | 8.58% | motif file (matrix) |
svg |
37 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.235e+00 | 0.0026 | 8.0 | 0.88% | 83.0 | 0.18% | motif file (matrix) |
svg |
38 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-3 | -7.785e+00 | 0.0040 | 30.0 | 3.31% | 770.2 | 1.67% | motif file (matrix) |
svg |
39 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -7.696e+00 | 0.0042 | 15.0 | 1.66% | 274.5 | 0.60% | motif file (matrix) |
svg |
40 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -7.536e+00 | 0.0049 | 18.0 | 1.99% | 371.1 | 0.80% | motif file (matrix) |
svg |
41 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-3 | -7.473e+00 | 0.0050 | 112.0 | 12.38% | 4185.1 | 9.08% | motif file (matrix) |
svg |
42 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-3 | -7.466e+00 | 0.0050 | 3.0 | 0.33% | 8.6 | 0.02% | motif file (matrix) |
svg |
43 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -7.437e+00 | 0.0050 | 189.0 | 20.88% | 7699.1 | 16.70% | motif file (matrix) |
svg |
44 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.205e+00 | 0.0061 | 69.0 | 7.62% | 2353.0 | 5.10% | motif file (matrix) |
svg |
45 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.072e+00 | 0.0069 | 252.0 | 27.85% | 10743.0 | 23.30% | motif file (matrix) |
svg |
46 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -6.926e+00 | 0.0078 | 80.0 | 8.84% | 2848.2 | 6.18% | motif file (matrix) |
svg |
47 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.781e+00 | 0.0088 | 51.0 | 5.64% | 1644.5 | 3.57% | motif file (matrix) |
svg |
48 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -6.669e+00 | 0.0096 | 41.0 | 4.53% | 1251.2 | 2.71% | motif file (matrix) |
svg |
49 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -6.108e+00 | 0.0165 | 81.0 | 8.95% | 2980.3 | 6.46% | motif file (matrix) |
svg |
50 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.955e+00 | 0.0189 | 46.0 | 5.08% | 1506.9 | 3.27% | motif file (matrix) |
svg |
51 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -5.843e+00 | 0.0207 | 71.0 | 7.85% | 2574.1 | 5.58% | motif file (matrix) |
svg |
52 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.823e+00 | 0.0207 | 167.0 | 18.45% | 6938.0 | 15.05% | motif file (matrix) |
svg |
53 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.714e+00 | 0.0227 | 35.0 | 3.87% | 1080.1 | 2.34% | motif file (matrix) |
svg |
54 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.625e+00 | 0.0243 | 47.0 | 5.19% | 1575.7 | 3.42% | motif file (matrix) |
svg |
55 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.496e+00 | 0.0272 | 110.0 | 12.15% | 4355.2 | 9.44% | motif file (matrix) |
svg |
56 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.330e+00 | 0.0315 | 44.0 | 4.86% | 1476.5 | 3.20% | motif file (matrix) |
svg |
57 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.195e+00 | 0.0354 | 40.0 | 4.42% | 1322.4 | 2.87% | motif file (matrix) |
svg |
58 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.168e+00 | 0.0358 | 42.0 | 4.64% | 1407.0 | 3.05% | motif file (matrix) |
svg |
59 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.099e+00 | 0.0377 | 113.0 | 12.49% | 4552.6 | 9.87% | motif file (matrix) |
svg |
60 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.077e+00 | 0.0379 | 91.0 | 10.06% | 3554.7 | 7.71% | motif file (matrix) |
svg |
61 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -5.028e+00 | 0.0391 | 92.0 | 10.17% | 3606.9 | 7.82% | motif file (matrix) |
svg |
62 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -4.952e+00 | 0.0415 | 86.0 | 9.50% | 3346.4 | 7.26% | motif file (matrix) |
svg |
63 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.951e+00 | 0.0415 | 19.0 | 2.10% | 511.1 | 1.11% | motif file (matrix) |
svg |
64 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -4.950e+00 | 0.0415 | 92.0 | 10.17% | 3617.2 | 7.84% | motif file (matrix) |
svg |
65 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.699e+00 | 0.0510 | 84.0 | 9.28% | 3291.7 | 7.14% | motif file (matrix) |
svg |
66 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.684e+00 | 0.0510 | 67.0 | 7.40% | 2533.2 | 5.49% | motif file (matrix) |
svg |
67 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -4.621e+00 | 0.0535 | 62.0 | 6.85% | 2320.4 | 5.03% | motif file (matrix) |
svg |