Information for 10-CTGGCCAGAG (Motif 21)

A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T G T A C A C G T A C T G A C T G A G T C G T A C C G T A A C T G
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.938
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif97.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets61.8 +/- 27.4bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCAGAG
ATTCTCGCGAGA-
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCAGAG
WDNCTGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGCCAGAG-
-ATGCCAGACN
 A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGGCCAGAG
--TGCCAA--
 A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGCCAGAG
CGTGCCAAG-
 A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCAGAG--
GTTCTCGCGAGANCC
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGCCAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCAGAG
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGCCAGAG----
NTGCCCANNGGTNA
 A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G A C G T A C G T A C G T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGCCAGAG
CTTGGCAA--
 A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A A T C G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T