Information for 2-TAATYTAATT (Motif 3)

G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T
Reverse Opposite:
C T G A C G T A G C A T A G C T C G T A T C G A C T G A A C G T G C A T C G T A
p-value:1e-44
log p-value:-1.035e+02
Information Content per bp:1.613
Number of Target Sequences with motif247.0
Percentage of Target Sequences with motif29.47%
Number of Background Sequences with motif5226.7
Percentage of Background Sequences with motif11.36%
Average Position of motif in Targets49.0 +/- 26.0bp
Average Position of motif in Background50.0 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-TAATYTAATT-
NTAATBNAATTA
 A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TAATYTAATT-
TAATTTAATTA
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TAATYTAATT--
TAATYNRATTAR
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TAATYTAATT-
TAATTTAATTA
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TAATYTAATT-
TAATTTAATTA
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TAATYTAATT--
TAATCHGATTAC
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T A C G T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

DUX4/MA0468.1/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TAATYTAATT-
TAATTTAATCA
 G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A

DUXA/MA0884.1/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TAATYTAATT--
CTAATTTAATCAA
 A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T A C G T
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAATYTAATT---
NWTAAYCYAATCAWN
 A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TAATYTAATT----
NNNTATTGAATTGNNN
 A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A C G T A C G A T G A C T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T