Information for 13-TAATGAGCAG (Motif 28)

A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A G T C C G A T A G T C C G T A C G A T A C G T C T G A
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.865
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif291.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets47.5 +/- 21.7bp
Average Position of motif in Background49.6 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAGCAG
NTAATGAGCT-
 A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAGCAG--
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAGCAG--
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCAG
NNTAATTAGN--
 A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAATGAGCAG--
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAGCAG--
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCAG
NNTAATTANN--
 A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAATGAGCAG
TAATTAGN--
 A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAATGAGCAG
GNTAATTANN--
 A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATGAGCAG
CCTAATTACC--
 A C G T A C G T A G C T C G T A G C T A A C G T A C T G C G T A A C T G A G T C C G T A A C T G
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C A C G T A C G T