Information for 19-GTCAGCCTCCAGA (Motif 26)

A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A T C G G T C A C A T G A T C G T A G C C G A T A C T G G T C A G T A C
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.4 +/- 23.2bp
Average Position of motif in Background57.6 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTCAGCCTCCAGA--
-----ATGCCAGACN
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GTCAGCCTCCAGA-----
--------CCAGACRSVB
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GTCAGCCTCCAGA---
--------CCAGACAG
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCAGCCTCCAGA-------
---CAAATCCAGACATCACA
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GTCAGCCTCCAGA----
-------TCCAGATGTT
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCAGCCTCCAGA-
TGACANARRCCAGRC
 A C G T A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

POL002.1_INR/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCAGCCTCCAGA
-TCAGTCTT----
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTCAGCCTCCAGA-----
-----CATCCAGATGTTC
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCCTCCAGA
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTCAGCCTCCAGA---
-BCNGGTTCTAGANCN
 A C T G A C G T A G T C C G T A A C T G A T G C G T A C A C G T A T G C A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T