Information for 9-AAATTAAACG (Motif 23)

G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
Reverse Opposite:
A T G C C A T G A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.853
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif132.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets61.8 +/- 29.0bp
Average Position of motif in Background47.1 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAATTAAACG
--ATTAAA--
 G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AAATTAAACG
ACTAATTAAA--
 A C G T A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAACG
CTAATTAA---
 A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAACG
TTAATTAA---
 A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAATTAAACG
NCAATTAN---
 A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T A C G T A C G T

MIXL1/MA0662.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTAAACG
TCTAATTAAC--
 A C G T A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
C G A T A G T C G A C T T C G A G C T A A G C T A G C T G C T A T C G A T G A C A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTAAACG
TCTAATTAAA--
 A C G T A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTAAACG
GGTAATTAAA--
 A C G T A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTAAACG
GCCAATTAAC--
 A C G T A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAACG
CTAATTAA---
 A C G T G T C A C G T A C G T A C G A T C G A T C G T A T C G A C G T A G T A C A T C G
A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T