p-value: | 1e-9 |
log p-value: | -2.129e+01 |
Information Content per bp: | 1.628 |
Number of Target Sequences with motif | 123.0 |
Percentage of Target Sequences with motif | 14.68% |
Number of Background Sequences with motif | 3805.6 |
Percentage of Background Sequences with motif | 8.27% |
Average Position of motif in Targets | 50.8 +/- 27.9bp |
Average Position of motif in Background | 50.2 +/- 34.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.08 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG- ---CTGTCTGG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG- ---TWGTCTGV |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG- -VBSYGTCTGG |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | DSMCTGNCTG-- --VBTGWCAGCB |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG-- ------GCTGTG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -DSMCTGNCTG------ NNTNNTGTCTGGNNTNG |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----DSMCTGNCTG- GTCATGCHTGRCTGS |
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Myb/MA0100.2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | DSMCTGNCTG---- ----TGGCAGTTGN |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG- ---TTGACAGC |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | DSMCTGNCTG- ---YTGWCADY |
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