Information for 7-CCTTAGGCTA (Motif 19)

A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
Reverse Opposite:
G C A T C G T A A C T G A G T C G T A C C A G T C T G A C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.854
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif30.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.0 +/- 25.8bp
Average Position of motif in Background49.9 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGCTA
NGCCTNAGGCN-
 A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGCTA
TGCCTGAGGCN-
 A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGCTA-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGGCTA
NGCCTGAGGCN-
 A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCTTAGGCTA-
SCCTSAGGSCAW
 A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGCTA
ATGCCCTGAGGC--
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTA-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGCTA-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCTTAGGCTA-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTTAGGCTA
NTGCCCTTGGGCGN
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A G C T G T C A A C T G A C T G A G T C C G A T C G T A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G