Information for 15-WGCCAGAAACTGG (Motif 16)

C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A A C T G A C G T A G C T A G C T A G T C C G A T C T A G A C T G G A T C G C A T
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.695
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif183.5
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets54.8 +/- 25.8bp
Average Position of motif in Background50.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-WGCCAGAAACTGG
ATGCCAGACN----
 A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----WGCCAGAAACTGG
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGCCAGAAACTGG
CGTGCCAAG------
 A C G T A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WGCCAGAAACTGG
TGCCAA-------
 C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---WGCCAGAAACTGG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---WGCCAGAAACTGG
AGGTGHCAGACA----
 A C G T A C G T A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WGCCAGAAACTGG
TTGCCAAG------
 A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WGCCAGAAACTGG
--CCAGACAG---
 C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---WGCCAGAAACTGG
AGGTGNCAGACAG---
 A C G T A C G T A C G T C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:WGCCAGAAACTGG
--CCAGACRSVB-
 C G T A C A T G T G A C A G T C C G T A T C A G C T G A T C G A T G C A G T A C C G A T A C T G C T A G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T