Information for 10-KCCAGGCCTKSCW (Motif 11)

A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
Reverse Opposite:
C G T A C A T G T A C G T G A C C T G A A C T G T A C G A T G C A G T C A C G T A C T G A T C G T G A C
p-value:1e-13
log p-value:-3.051e+01
Information Content per bp:1.659
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif616.5
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets53.3 +/- 27.1bp
Average Position of motif in Background49.5 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:KCCAGGCCTKSCW
-CNAGGCCT----
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:KCCAGGCCTKSCW
-CTAGGCCT----
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:KCCAGGCCTKSCW---
--CAGGCCNNGGCCNN
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--KCCAGGCCTKSCW
ATGCCAGACN-----
 A C G T A C G T A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KCCAGGCCTKSCW
CACAGN-------
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KCCAGGCCTKSCW
-VCAGGTRDRY--
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---KCCAGGCCTKSCW
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------KCCAGGCCTKSCW
AAGGKGRCGCAGGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:KCCAGGCCTKSCW--
GTCATGCHTGRCTGS
 A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------KCCAGGCCTKSCW
TGACANARRCCAGRC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G A T C G A T G C G T A C G A C T A C T G A T G C G T A C G C A T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T