Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-16 | -3.696e+01 | 0.0000 | 94.0 | 14.01% | 2535.3 | 5.43% | motif file (matrix) |
svg |
2 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-13 | -3.085e+01 | 0.0000 | 119.0 | 17.73% | 4007.5 | 8.58% | motif file (matrix) |
svg |
3 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.808e+01 | 0.0000 | 72.0 | 10.73% | 1951.2 | 4.18% | motif file (matrix) |
svg |
4 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.754e+01 | 0.0000 | 128.0 | 19.08% | 4674.9 | 10.00% | motif file (matrix) |
svg |
5 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.284e+01 | 0.0000 | 65.0 | 9.69% | 1876.0 | 4.01% | motif file (matrix) |
svg |
6 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-8 | -1.908e+01 | 0.0000 | 90.0 | 13.41% | 3298.5 | 7.06% | motif file (matrix) |
svg |
7 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 21.0 | 3.13% | 390.1 | 0.83% | motif file (matrix) |
svg |
8 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.458e+01 | 0.0000 | 55.0 | 8.20% | 1846.8 | 3.95% | motif file (matrix) |
svg |
9 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.345e+01 | 0.0001 | 46.0 | 6.86% | 1482.1 | 3.17% | motif file (matrix) |
svg |
10 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.129e+01 | 0.0005 | 47.0 | 7.00% | 1663.6 | 3.56% | motif file (matrix) |
svg |
11 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.102e+01 | 0.0005 | 26.0 | 3.87% | 701.9 | 1.50% | motif file (matrix) |
svg |
12 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -9.113e+00 | 0.0033 | 30.0 | 4.47% | 974.4 | 2.09% | motif file (matrix) |
svg |
13 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-3 | -8.298e+00 | 0.0070 | 37.0 | 5.51% | 1370.0 | 2.93% | motif file (matrix) |
svg |
14 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -8.177e+00 | 0.0073 | 13.0 | 1.94% | 281.2 | 0.60% | motif file (matrix) |
svg |
15 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-3 | -7.333e+00 | 0.0159 | 47.0 | 7.00% | 1978.2 | 4.23% | motif file (matrix) |
svg |
16 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.451e+00 | 0.0977 | 8.0 | 1.19% | 175.3 | 0.38% | motif file (matrix) |
svg |
17 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.384e+00 | 0.0983 | 27.0 | 4.02% | 1080.4 | 2.31% | motif file (matrix) |
svg |
18 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -5.022e+00 | 0.1333 | 7.0 | 1.04% | 150.2 | 0.32% | motif file (matrix) |
svg |
19 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -4.953e+00 | 0.1353 | 7.0 | 1.04% | 152.9 | 0.33% | motif file (matrix) |
svg |
20 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -4.852e+00 | 0.1422 | 22.0 | 3.28% | 861.9 | 1.84% | motif file (matrix) |
svg |
21 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.699e+00 | 0.1579 | 203.0 | 30.25% | 12206.7 | 26.12% | motif file (matrix) |
svg |