Information for 2-CCCRTGRGGC (Motif 9)

A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C
Reverse Opposite:
A T C G G A T C A G T C G A T C A G T C C G T A G A C T C T A G C A T G A T C G
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.763
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif510.5
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets52.8 +/- 25.6bp
Average Position of motif in Background51.3 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCRTGRGGC-
TGCCCTGAGGGCA
 A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCRTGRGGC-
TCCCCTGGGGAC
 A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCRTGRGGC-
TCCCNNGGGACN
 A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCRTGRGGC-
TGCCCTGAGGGCA
 A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCRTGRGGC-
TGCCCTGAGGGCA
 A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCRTGRGGC-
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCRTGRGGC--
NTGCCCTAGGGCAA
 A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCCRTGRGGC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCCRTGRGGC-
TGCCCCCGGGCA
 A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCRTGRGGC-
TGCCCTNGGGCA
 A C G T A T G C G T A C A G T C C T G A A C G T C T A G C T A G A C T G C T A G A T G C A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A