Information for 6-GAACCCTCAGCCAAGC (Motif 7)

A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T A C G T A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T C G G C A T A C G T A T G C
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.6 +/- 28.7bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAACCCTCAGCCAAGC---
----TCCCAGMCRAGCCCC
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAACCCTCAGCCAAGC-----
------SCAGYCADGCATGAC
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC------
------GCAGCCAAGCGTGACN
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC
--AGCCTCAGGCA---
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC
---SCCTSAGGSCAW-
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAACCCTCAGCCAAGC
------BCAGACWA--
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC
--CGCCTCAGGCA---
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAACCCTCAGCCAAGC
-AAACCACAGAN----
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC
ATTGCCTGAGGCAAT-
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAACCCTCAGCCAAGC
--AGCCTCAGGCA---
 A T C G C G T A C G T A A T G C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A G T C G T C A C G T A A C T G A G T C
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T