Information for 4-ACTCCCCTTSAGCCYT (Motif 5)

T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
Reverse Opposite:
G T C A C T A G C T A G A C T G A T G C A C G T A T G C G T C A T C G A A C T G A C T G C T A G A T C G G T C A A T C G A G C T
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.729
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 14.6bp
Average Position of motif in Background58.3 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--TGACCTTGACCT--
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--TGACCTTGACCT--
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
GCTGACCTTGAACTN-
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--CCCCCTTGGGCCCC
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--TGACCTTGAV----
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--TCCCCA--------
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT----
---NNNNTTGACCCCTNNNN
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT
--TGACCTTGAN----
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACTCCCCTTSAGCCYT-
----CNNTTGACCTTTG
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACTCCCCTTSAGCCYT
-NTGACCTTGA-----
 T C G A A T G C C A G T A T G C A G T C A G T C A G T C A G C T C A G T A T C G T G C A T A C G A G T C A G T C A G T C A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T