Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-226 | -5.204e+02 | 0.0000 | 399.0 | 50.25% | 3303.3 | 7.44% | motif file (matrix) |
svg |
2 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-219 | -5.052e+02 | 0.0000 | 378.0 | 47.61% | 2970.8 | 6.69% | motif file (matrix) |
svg |
3 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-215 | -4.958e+02 | 0.0000 | 463.0 | 58.31% | 5230.1 | 11.78% | motif file (matrix) |
svg |
4 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-201 | -4.644e+02 | 0.0000 | 321.0 | 40.43% | 2141.3 | 4.82% | motif file (matrix) |
svg |
5 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-182 | -4.212e+02 | 0.0000 | 290.0 | 36.52% | 1879.8 | 4.23% | motif file (matrix) |
svg |
6 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-93 | -2.152e+02 | 0.0000 | 107.0 | 13.48% | 342.4 | 0.77% | motif file (matrix) |
svg |
7 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-48 | -1.118e+02 | 0.0000 | 64.0 | 8.06% | 268.6 | 0.61% | motif file (matrix) |
svg |
8 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-44 | -1.032e+02 | 0.0000 | 80.0 | 10.08% | 554.1 | 1.25% | motif file (matrix) |
svg |
9 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-37 | -8.684e+01 | 0.0000 | 53.0 | 6.68% | 251.0 | 0.57% | motif file (matrix) |
svg |
10 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-33 | -7.751e+01 | 0.0000 | 188.0 | 23.68% | 4021.0 | 9.06% | motif file (matrix) |
svg |
11 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-30 | -6.970e+01 | 0.0000 | 207.0 | 26.07% | 4995.1 | 11.25% | motif file (matrix) |
svg |
12 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-28 | -6.567e+01 | 0.0000 | 136.0 | 17.13% | 2581.2 | 5.81% | motif file (matrix) |
svg |
13 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-27 | -6.352e+01 | 0.0000 | 109.0 | 13.73% | 1789.6 | 4.03% | motif file (matrix) |
svg |
14 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-16 | -3.819e+01 | 0.0000 | 128.0 | 16.12% | 3214.4 | 7.24% | motif file (matrix) |
svg |
15 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-14 | -3.446e+01 | 0.0000 | 188.0 | 23.68% | 5871.0 | 13.22% | motif file (matrix) |
svg |
16 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-14 | -3.404e+01 | 0.0000 | 337.0 | 42.44% | 12973.0 | 29.22% | motif file (matrix) |
svg |
17 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-13 | -3.186e+01 | 0.0000 | 93.0 | 11.71% | 2165.9 | 4.88% | motif file (matrix) |
svg |
18 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-11 | -2.711e+01 | 0.0000 | 28.0 | 3.53% | 290.0 | 0.65% | motif file (matrix) |
svg |
19 |
| Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.290e+01 | 0.0000 | 48.0 | 6.05% | 921.4 | 2.08% | motif file (matrix) |
svg |
20 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-9 | -2.202e+01 | 0.0000 | 118.0 | 14.86% | 3625.3 | 8.17% | motif file (matrix) |
svg |
21 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-9 | -2.176e+01 | 0.0000 | 98.0 | 12.34% | 2811.5 | 6.33% | motif file (matrix) |
svg |
22 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-8 | -2.064e+01 | 0.0000 | 195.0 | 24.56% | 7200.2 | 16.22% | motif file (matrix) |
svg |
23 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-8 | -1.947e+01 | 0.0000 | 225.0 | 28.34% | 8756.8 | 19.72% | motif file (matrix) |
svg |
24 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.804e+01 | 0.0000 | 144.0 | 18.14% | 5051.8 | 11.38% | motif file (matrix) |
svg |
25 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.777e+01 | 0.0000 | 219.0 | 27.58% | 8636.1 | 19.45% | motif file (matrix) |
svg |
26 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 65.0 | 8.19% | 1822.5 | 4.10% | motif file (matrix) |
svg |
27 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-6 | -1.444e+01 | 0.0000 | 55.0 | 6.93% | 1484.8 | 3.34% | motif file (matrix) |
svg |
28 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.418e+01 | 0.0000 | 26.0 | 3.27% | 469.8 | 1.06% | motif file (matrix) |
svg |
29 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-5 | -1.339e+01 | 0.0000 | 91.0 | 11.46% | 3046.2 | 6.86% | motif file (matrix) |
svg |
30 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.302e+01 | 0.0000 | 44.0 | 5.54% | 1131.5 | 2.55% | motif file (matrix) |
svg |
31 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-5 | -1.294e+01 | 0.0000 | 53.0 | 6.68% | 1482.0 | 3.34% | motif file (matrix) |
svg |
32 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-5 | -1.284e+01 | 0.0000 | 99.0 | 12.47% | 3444.0 | 7.76% | motif file (matrix) |
svg |
33 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.167e+01 | 0.0001 | 63.0 | 7.93% | 1964.1 | 4.42% | motif file (matrix) |
svg |
34 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-5 | -1.157e+01 | 0.0001 | 53.0 | 6.68% | 1557.4 | 3.51% | motif file (matrix) |
svg |
35 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 128.0 | 16.12% | 4902.5 | 11.04% | motif file (matrix) |
svg |
36 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.130e+01 | 0.0001 | 274.0 | 34.51% | 12259.6 | 27.61% | motif file (matrix) |
svg |
37 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-4 | -1.100e+01 | 0.0002 | 91.0 | 11.46% | 3240.0 | 7.30% | motif file (matrix) |
svg |
38 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.048e+01 | 0.0003 | 51.0 | 6.42% | 1540.5 | 3.47% | motif file (matrix) |
svg |
39 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-4 | -1.046e+01 | 0.0003 | 67.0 | 8.44% | 2218.8 | 5.00% | motif file (matrix) |
svg |
40 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-4 | -1.024e+01 | 0.0003 | 9.0 | 1.13% | 87.1 | 0.20% | motif file (matrix) |
svg |
41 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-4 | -9.738e+00 | 0.0005 | 9.0 | 1.13% | 93.1 | 0.21% | motif file (matrix) |
svg |
42 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-4 | -9.559e+00 | 0.0006 | 24.0 | 3.02% | 544.0 | 1.23% | motif file (matrix) |
svg |
43 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -9.186e+00 | 0.0009 | 78.0 | 9.82% | 2811.1 | 6.33% | motif file (matrix) |
svg |
44 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-3 | -9.153e+00 | 0.0009 | 74.0 | 9.32% | 2633.1 | 5.93% | motif file (matrix) |
svg |
45 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-3 | -8.983e+00 | 0.0010 | 22.0 | 2.77% | 495.3 | 1.12% | motif file (matrix) |
svg |
46 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-3 | -8.672e+00 | 0.0014 | 127.0 | 15.99% | 5182.9 | 11.67% | motif file (matrix) |
svg |
47 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.441e+00 | 0.0017 | 24.0 | 3.02% | 587.2 | 1.32% | motif file (matrix) |
svg |
48 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -8.396e+00 | 0.0017 | 104.0 | 13.10% | 4105.9 | 9.25% | motif file (matrix) |
svg |
49 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-3 | -8.379e+00 | 0.0017 | 56.0 | 7.05% | 1897.1 | 4.27% | motif file (matrix) |
svg |
50 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -8.285e+00 | 0.0018 | 64.0 | 8.06% | 2259.1 | 5.09% | motif file (matrix) |
svg |
51 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.949e+00 | 0.0025 | 180.0 | 22.67% | 7933.6 | 17.87% | motif file (matrix) |
svg |
52 |
| Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer | 1e-3 | -7.516e+00 | 0.0038 | 49.0 | 6.17% | 1659.0 | 3.74% | motif file (matrix) |
svg |
53 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.349e+00 | 0.0044 | 50.0 | 6.30% | 1715.4 | 3.86% | motif file (matrix) |
svg |
54 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-3 | -7.269e+00 | 0.0047 | 61.0 | 7.68% | 2214.4 | 4.99% | motif file (matrix) |
svg |
55 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-3 | -7.238e+00 | 0.0048 | 85.0 | 10.71% | 3334.0 | 7.51% | motif file (matrix) |
svg |
56 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.189e+00 | 0.0049 | 38.0 | 4.79% | 1209.8 | 2.72% | motif file (matrix) |
svg |
57 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-3 | -7.139e+00 | 0.0051 | 54.0 | 6.80% | 1910.5 | 4.30% | motif file (matrix) |
svg |
58 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.841e+00 | 0.0067 | 13.0 | 1.64% | 261.8 | 0.59% | motif file (matrix) |
svg |
59 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-2 | -6.514e+00 | 0.0091 | 104.0 | 13.10% | 4341.3 | 9.78% | motif file (matrix) |
svg |
60 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.341e+00 | 0.0107 | 72.0 | 9.07% | 2819.5 | 6.35% | motif file (matrix) |
svg |
61 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.169e+00 | 0.0125 | 87.0 | 10.96% | 3558.7 | 8.02% | motif file (matrix) |
svg |
62 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.142e+00 | 0.0126 | 60.0 | 7.56% | 2278.5 | 5.13% | motif file (matrix) |
svg |
63 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -6.060e+00 | 0.0135 | 25.0 | 3.15% | 741.3 | 1.67% | motif file (matrix) |
svg |
64 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.879e+00 | 0.0159 | 59.0 | 7.43% | 2259.4 | 5.09% | motif file (matrix) |
svg |
65 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -5.773e+00 | 0.0174 | 6.0 | 0.76% | 78.9 | 0.18% | motif file (matrix) |
svg |
66 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.753e+00 | 0.0175 | 46.0 | 5.79% | 1673.0 | 3.77% | motif file (matrix) |
svg |
67 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.615e+00 | 0.0198 | 49.0 | 6.17% | 1823.9 | 4.11% | motif file (matrix) |
svg |
68 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -5.445e+00 | 0.0231 | 29.0 | 3.65% | 947.9 | 2.14% | motif file (matrix) |
svg |
69 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.954e+00 | 0.0372 | 70.0 | 8.82% | 2893.2 | 6.52% | motif file (matrix) |
svg |
70 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.773e+00 | 0.0440 | 75.0 | 9.45% | 3162.7 | 7.12% | motif file (matrix) |
svg |