Information for 7-CTAATCTGATCAG (Motif 6)

A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G T C G A A C G T A G T C C G T A A C T G C G T A A C G T A C G T C G T A A C T G
p-value:1e-13
log p-value:-3.076e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.3 +/- 10.7bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTAATCTGATCAG
GTAATCDGATTA-
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

DUX4/MA0468.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTAATCTGATCAG
-TAATTTAATCA-
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTAATCTGATCAG
CTAATTTAATCAA
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTAATCTGATCAG
YTAATYNRATTA-
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAATCTGATCAG
GCTAATCC------
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAATCTGATCAG
CCTAATCCGC----
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAATCTGATCAG
YTAATCCY-----
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTAATCTGATCAG
TTAATCCG-----
 A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTAATCTGATCAG-
NWTAAYCYAATCAWN
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCTGATCAG
NNTAATCCNGNCNN
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G A T A C T G C G T A A C G T A G T C C G T A A C T G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A