Information for 10-TGTGTTATGA (Motif 12)

A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A
Reverse Opposite:
A C G T G T A C G T C A A C G T G T C A G C T A T A G C C G T A G T A C C G T A
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.848
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif153.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets51.0 +/- 30.3bp
Average Position of motif in Background48.7 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTATGA----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTATGA--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTTATGA---
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTATGA----
NNNTGTTGTTGTTNG
 A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTATGA---
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTTATGA
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTGTTATGA-
-NTTTTATGAC
 A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTGTTATGA-
-NTTTTACGAC
 A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A A C G T
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTTATGA
CTGTGGTTTN-
 A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGTGTTATGA
GCTGTGGTTT--
 A C G T A C G T A C G T A C T G C G A T A T C G C G A T A C G T C G T A A C G T A C T G G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T