Information for 9-TTTCCVTCAA (Motif 10)

A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G C G T A A G C T C T A G C T A G C T G A G T C A C T G A
p-value:1e-12
log p-value:-2.874e+01
Information Content per bp:1.753
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif555.9
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets54.6 +/- 25.4bp
Average Position of motif in Background50.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTCCVTCAA------
TCACCCATCAATAAACA
 A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTTCCVTCAA
NCTGTCAATCAN
 A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTTCCVTCAA
SCTGTCAVTCAV
 A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTCCVTCAA-
CCATCAATCAAA
 A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTCCVTCAA
GSCTGTCACTCA-
 A C G T A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTCCVTCAA
--GCTGTCAA
 A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTCCVTCAA-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTCCVTCAA
--CCAATCAA
 A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTCCVTCAA
ATTTTCCATT--
 A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTCCVTCAA--
NATTTCCNGGAAAT
 A C G T A C G T A G C T C A G T G A C T A G T C G A T C T C G A C G A T A G T C C G T A G T C A A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T