Information for 3-TGCGTCTGSYTGGTGT (Motif 6)

C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
Reverse Opposite:
C G T A G T A C C G T A A T G C G T A C G T C A C T G A A T C G G T A C C G T A A T C G C G T A A T G C A T C G G T A C C G T A
p-value:1e-15
log p-value:-3.632e+01
Information Content per bp:1.743
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.1 +/- 26.0bp
Average Position of motif in Background48.9 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCGTCTGSYTGGTGT--
---GYCTGGYYTNTGTCA
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCGTCTGSYTGGTGT
NTGGGTGTGGCC-----
 A C G T C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCGTCTGSYTGGTGT
TGGGTGTGGC------
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCGTCTGSYTGGTGT
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCGTCTGSYTGGTGT
TGGGTGTGGCN-----
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGCGTCTGSYTGGTGT--
------TGACAGGTGTCA
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGCGTCTGSYTGGTGT
--GGTCTGGCAT----
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TGCGTCTGSYTGGTGT--
------TGACAGGTGTCA
 C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTCTGSYTGGTGT
GGNGCGNCTGTTNNN---
 A C G T A C G T C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGCGTCTGSYTGGTGT
VBSYGTCTGG-------
 A C G T C G A T A C T G A T G C T A C G C G A T T A G C A C G T A C T G A T C G A G C T C A G T A C T G A T C G G C A T A C T G C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T