p-value: | 1e-13 |
log p-value: | -3.040e+01 |
Information Content per bp: | 1.820 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 0.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 70.5 +/- 22.3bp |
Average Position of motif in Background | 72.0 +/- 6.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGRSCAGCAGRGSCRC -DCHCAGCAGGRGGCC |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGRSCAGCAGRGSCRC --CACAGCAGGGGG-- |
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SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGRSCAGCAGRGSCRC --ANCAGCTG------ |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGRSCAGCAGRGSCRC -DCTCAGCAGG----- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGRSCAGCAGRGSCRC CCACACAGCAGGAGA-- |
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Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGRSCAGCAGRGSCRC --NVCAGCTGBBNN-- |
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Myog/MA0500.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGRSCAGCAGRGSCRC --GACAGCTGCAG--- |
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NHLH1/MA0048.2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGRSCAGCAGRGSCRC --CGCAGCTGCG---- |
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Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGRSCAGCAGRGSCRC -NAHCAGCTGD----- |
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Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGRSCAGCAGRGSCRC ---NCAGCTGCTG--- |
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