Information for 3-TAATTTAATTTAG (Motif 3)

C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
Reverse Opposite:
G A T C G A C T C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A G C T C G T A
p-value:1e-21
log p-value:-4.922e+01
Information Content per bp:1.826
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 20.5bp
Average Position of motif in Background56.1 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TAATTTAATTTAG
---TTTAAT----
 C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TAATTTAATTTAG
-ATATTAATTAA-
 C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAATTTAATTTAG
TAATTTAATTA--
 C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAATTTAATTTAG
GATTAATTAATTT--
 A C G T A C G T C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAATTTAATTTAG
TAATTTAATTA--
 C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTAATTTAG---
NNNTTTTAATTAANNNN
 A C G T C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTAATTTAG---
ANNATTTAATTAATTNN
 A C G T C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0093.1_Lhx3/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTTAATTTAG---
NNTATTTAATTAATTNN
 A C G T C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G A C G T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

Phox2b/MA0681.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAATTTAATTTAG
TAATTTAATTA--
 C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAATTTAATTTAG---
AGTTTTTAATTAATTTG
 A C G T C G A T C T G A G T C A C G A T A C G T A C G T C G T A C G T A A C G T C G A T A C G T C T G A C T A G A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G