Information for 7-AGGAGATAAATCAATT (Motif 18)

C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
Reverse Opposite:
T G C A C G T A G C A T A G C T A C T G G C T A C G A T G C A T C A G T G T C A C G A T A G T C C G A T G T A C G T A C C G A T
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.643
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif401.7
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets52.4 +/- 24.8bp
Average Position of motif in Background53.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
-GGCCATAAATCA---
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
-GGCCATAAATCAC--
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
-----HNRAATCAAT-
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
---AGATAAGA-----
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
-GGCCATAAATCA---
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATCAATT-
-GAAGATCAATCACTTA
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T A C G T
A C G T T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGAGATAAATCAATT
AAACAGACAAAGGAAT-
 A C G T C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGAGATAAATCAATT
NNGAGATAAGA-----
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGAGATAAATCAATT-
-GAAGATCAATCACTAA
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T A C G T
A C G T T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGAGATAAATCAATT
---AGATAASR-----
 C G T A C A T G C A T G C G T A T C A G G C T A A C G T G C T A C G T A G C T A C G A T G T A C T C G A C G T A C G A T A C G T
A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T