Information for 8-TTCCAGACAC (Motif 12)

A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
Reverse Opposite:
A C T G A G C T A C T G A G C T A G T C C G A T A C T G A C T G G C T A T G C A
p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.729
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.13%
Number of Background Sequences with motif386.8
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets46.0 +/- 27.0bp
Average Position of motif in Background47.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAC--
--CCAGACRSVB
 A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAC
--CCAGACAG
 A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACAC----
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAGACAC
ATGCCAGACN-
 A C G T A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTCCAGACAC
--BCAGACWA
 A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGACAC
AGGTGHCAGACA-
 A C G T A C G T A C G T A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCCAGACAC---
AGCAACAGCCGCACC
 A C G T A C G T A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCCAGACAC
---TTGACAG
 A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTCCAGACAC-
-TGCTGACTCA
 A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCCAGACAC
AGGTGNCAGACAG
 A C G T A C G T A C G T A C G T C G A T T G A C A G T C C G T A A C T G T C G A A G T C T C G A T G A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G