Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-68 | -1.572e+02 | 0.0000 | 225.0 | 26.19% | 3134.0 | 6.86% | motif file (matrix) |
svg |
2 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-54 | -1.254e+02 | 0.0000 | 244.0 | 28.41% | 4361.1 | 9.55% | motif file (matrix) |
svg |
3 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-47 | -1.103e+02 | 0.0000 | 167.0 | 19.44% | 2383.4 | 5.22% | motif file (matrix) |
svg |
4 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-46 | -1.076e+02 | 0.0000 | 171.0 | 19.91% | 2544.1 | 5.57% | motif file (matrix) |
svg |
5 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-43 | -1.001e+02 | 0.0000 | 196.0 | 22.82% | 3451.8 | 7.56% | motif file (matrix) |
svg |
6 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-35 | -8.181e+01 | 0.0000 | 392.0 | 45.63% | 11762.3 | 25.75% | motif file (matrix) |
svg |
7 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-32 | -7.521e+01 | 0.0000 | 135.0 | 15.72% | 2186.5 | 4.79% | motif file (matrix) |
svg |
8 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-30 | -7.041e+01 | 0.0000 | 37.0 | 4.31% | 127.0 | 0.28% | motif file (matrix) |
svg |
9 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-30 | -6.968e+01 | 0.0000 | 255.0 | 29.69% | 6535.0 | 14.31% | motif file (matrix) |
svg |
10 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-23 | -5.308e+01 | 0.0000 | 34.0 | 3.96% | 168.3 | 0.37% | motif file (matrix) |
svg |
11 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-21 | -5.056e+01 | 0.0000 | 396.0 | 46.10% | 13805.6 | 30.22% | motif file (matrix) |
svg |
12 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-18 | -4.268e+01 | 0.0000 | 240.0 | 27.94% | 7252.3 | 15.88% | motif file (matrix) |
svg |
13 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-17 | -4.074e+01 | 0.0000 | 173.0 | 20.14% | 4624.5 | 10.12% | motif file (matrix) |
svg |
14 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-16 | -3.743e+01 | 0.0000 | 90.0 | 10.48% | 1772.4 | 3.88% | motif file (matrix) |
svg |
15 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-10 | -2.415e+01 | 0.0000 | 113.0 | 13.15% | 3122.8 | 6.84% | motif file (matrix) |
svg |
16 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-10 | -2.345e+01 | 0.0000 | 162.0 | 18.86% | 5163.7 | 11.30% | motif file (matrix) |
svg |
17 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-9 | -2.176e+01 | 0.0000 | 145.0 | 16.88% | 4562.3 | 9.99% | motif file (matrix) |
svg |
18 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-9 | -2.173e+01 | 0.0000 | 102.0 | 11.87% | 2823.6 | 6.18% | motif file (matrix) |
svg |
19 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-8 | -2.002e+01 | 0.0000 | 74.0 | 8.61% | 1851.4 | 4.05% | motif file (matrix) |
svg |
20 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-8 | -1.980e+01 | 0.0000 | 36.0 | 4.19% | 599.9 | 1.31% | motif file (matrix) |
svg |
21 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-8 | -1.892e+01 | 0.0000 | 92.0 | 10.71% | 2586.7 | 5.66% | motif file (matrix) |
svg |
22 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-7 | -1.684e+01 | 0.0000 | 113.0 | 13.15% | 3563.0 | 7.80% | motif file (matrix) |
svg |
23 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.470e+01 | 0.0000 | 56.0 | 6.52% | 1434.0 | 3.14% | motif file (matrix) |
svg |
24 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.463e+01 | 0.0000 | 62.0 | 7.22% | 1661.2 | 3.64% | motif file (matrix) |
svg |
25 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-5 | -1.269e+01 | 0.0000 | 61.0 | 7.10% | 1726.1 | 3.78% | motif file (matrix) |
svg |
26 |
| HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer | 1e-5 | -1.255e+01 | 0.0000 | 19.0 | 2.21% | 286.6 | 0.63% | motif file (matrix) |
svg |
27 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-4 | -1.028e+01 | 0.0005 | 11.0 | 1.28% | 125.6 | 0.27% | motif file (matrix) |
svg |
28 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.625e+00 | 0.0009 | 36.0 | 4.19% | 937.0 | 2.05% | motif file (matrix) |
svg |
29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.559e+00 | 0.0009 | 24.0 | 2.79% | 517.6 | 1.13% | motif file (matrix) |
svg |
30 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-4 | -9.334e+00 | 0.0011 | 45.0 | 5.24% | 1295.3 | 2.84% | motif file (matrix) |
svg |
31 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.293e+00 | 0.0011 | 82.0 | 9.55% | 2833.7 | 6.20% | motif file (matrix) |
svg |
32 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -9.077e+00 | 0.0013 | 56.0 | 6.52% | 1752.4 | 3.84% | motif file (matrix) |
svg |
33 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-3 | -9.056e+00 | 0.0013 | 36.0 | 4.19% | 965.7 | 2.11% | motif file (matrix) |
svg |
34 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -8.719e+00 | 0.0017 | 18.0 | 2.10% | 350.8 | 0.77% | motif file (matrix) |
svg |
35 |
| TATA-Box(TBP)/Promoter/Homer | 1e-3 | -8.717e+00 | 0.0017 | 99.0 | 11.53% | 3638.2 | 7.97% | motif file (matrix) |
svg |
36 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.483e+00 | 0.0021 | 307.0 | 35.74% | 13737.2 | 30.07% | motif file (matrix) |
svg |
37 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -8.479e+00 | 0.0021 | 118.0 | 13.74% | 4527.7 | 9.91% | motif file (matrix) |
svg |
38 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.401e+00 | 0.0022 | 30.0 | 3.49% | 774.1 | 1.69% | motif file (matrix) |
svg |
39 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.213e+00 | 0.0025 | 25.0 | 2.91% | 602.1 | 1.32% | motif file (matrix) |
svg |
40 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-3 | -8.050e+00 | 0.0029 | 104.0 | 12.11% | 3936.9 | 8.62% | motif file (matrix) |
svg |
41 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-3 | -7.737e+00 | 0.0039 | 123.0 | 14.32% | 4849.0 | 10.62% | motif file (matrix) |
svg |
42 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.693e+00 | 0.0040 | 250.0 | 29.10% | 11013.7 | 24.11% | motif file (matrix) |
svg |
43 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.567e+00 | 0.0044 | 28.0 | 3.26% | 740.0 | 1.62% | motif file (matrix) |
svg |
44 |
| NFY(CCAAT)/Promoter/Homer | 1e-3 | -7.533e+00 | 0.0044 | 54.0 | 6.29% | 1783.5 | 3.90% | motif file (matrix) |
svg |
45 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -7.487e+00 | 0.0045 | 91.0 | 10.59% | 3409.4 | 7.46% | motif file (matrix) |
svg |
46 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.014e+00 | 0.0071 | 46.0 | 5.36% | 1488.6 | 3.26% | motif file (matrix) |
svg |
47 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.009e+00 | 0.0071 | 11.0 | 1.28% | 184.3 | 0.40% | motif file (matrix) |
svg |
48 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-3 | -6.963e+00 | 0.0072 | 62.0 | 7.22% | 2174.9 | 4.76% | motif file (matrix) |
svg |
49 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -6.940e+00 | 0.0072 | 41.0 | 4.77% | 1287.0 | 2.82% | motif file (matrix) |
svg |
50 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.881e+00 | 0.0075 | 61.0 | 7.10% | 2138.4 | 4.68% | motif file (matrix) |
svg |
51 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.713e+00 | 0.0087 | 39.0 | 4.54% | 1221.5 | 2.67% | motif file (matrix) |
svg |
52 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.625e+00 | 0.0093 | 58.0 | 6.75% | 2031.7 | 4.45% | motif file (matrix) |
svg |
53 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-2 | -6.547e+00 | 0.0099 | 111.0 | 12.92% | 4445.2 | 9.73% | motif file (matrix) |
svg |
54 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.519e+00 | 0.0099 | 23.0 | 2.68% | 605.2 | 1.32% | motif file (matrix) |
svg |
55 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-2 | -6.460e+00 | 0.0104 | 110.0 | 12.81% | 4410.6 | 9.66% | motif file (matrix) |
svg |
56 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.355e+00 | 0.0113 | 195.0 | 22.70% | 8528.2 | 18.67% | motif file (matrix) |
svg |
57 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.346e+00 | 0.0113 | 12.0 | 1.40% | 232.0 | 0.51% | motif file (matrix) |
svg |
58 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -6.301e+00 | 0.0115 | 63.0 | 7.33% | 2281.4 | 4.99% | motif file (matrix) |
svg |
59 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.100e+00 | 0.0138 | 36.0 | 4.19% | 1141.9 | 2.50% | motif file (matrix) |
svg |
60 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.919e+00 | 0.0163 | 38.0 | 4.42% | 1237.9 | 2.71% | motif file (matrix) |
svg |
61 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.916e+00 | 0.0163 | 40.0 | 4.66% | 1321.2 | 2.89% | motif file (matrix) |
svg |
62 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.915e+00 | 0.0163 | 83.0 | 9.66% | 3227.6 | 7.07% | motif file (matrix) |
svg |
63 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -5.692e+00 | 0.0195 | 54.0 | 6.29% | 1944.1 | 4.26% | motif file (matrix) |
svg |
64 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -5.582e+00 | 0.0214 | 4.0 | 0.47% | 33.1 | 0.07% | motif file (matrix) |
svg |
65 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.560e+00 | 0.0216 | 179.0 | 20.84% | 7888.0 | 17.27% | motif file (matrix) |
svg |
66 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.552e+00 | 0.0216 | 29.0 | 3.38% | 894.0 | 1.96% | motif file (matrix) |
svg |
67 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.540e+00 | 0.0216 | 50.0 | 5.82% | 1783.6 | 3.90% | motif file (matrix) |
svg |
68 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.514e+00 | 0.0216 | 27.0 | 3.14% | 815.6 | 1.79% | motif file (matrix) |
svg |
69 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.478e+00 | 0.0220 | 45.0 | 5.24% | 1571.8 | 3.44% | motif file (matrix) |
svg |
70 |
| ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.450e+00 | 0.0223 | 33.0 | 3.84% | 1064.0 | 2.33% | motif file (matrix) |
svg |
71 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -5.363e+00 | 0.0240 | 36.0 | 4.19% | 1196.7 | 2.62% | motif file (matrix) |
svg |
72 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.348e+00 | 0.0240 | 15.0 | 1.75% | 366.2 | 0.80% | motif file (matrix) |
svg |
73 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.316e+00 | 0.0245 | 67.0 | 7.80% | 2567.9 | 5.62% | motif file (matrix) |
svg |
74 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.187e+00 | 0.0275 | 41.0 | 4.77% | 1424.5 | 3.12% | motif file (matrix) |
svg |
75 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.010e+00 | 0.0324 | 107.0 | 12.46% | 4481.1 | 9.81% | motif file (matrix) |
svg |
76 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -4.943e+00 | 0.0341 | 38.0 | 4.42% | 1316.6 | 2.88% | motif file (matrix) |
svg |
77 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.831e+00 | 0.0377 | 67.0 | 7.80% | 2626.8 | 5.75% | motif file (matrix) |
svg |
78 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.706e+00 | 0.0422 | 41.0 | 4.77% | 1469.0 | 3.22% | motif file (matrix) |
svg |
79 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -4.636e+00 | 0.0447 | 32.0 | 3.73% | 1085.1 | 2.38% | motif file (matrix) |
svg |