Information for 5-AKGGCAMTMA (Motif 5)

C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A
Reverse Opposite:
C G A T A C G T C T G A C A T G C G A T C T A G G T A C A G T C G T C A A C G T
p-value:1e-17
log p-value:-4.129e+01
Information Content per bp:1.696
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.87%
Number of Background Sequences with motif787.0
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets53.1 +/- 27.2bp
Average Position of motif in Background52.2 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AKGGCAMTMA--
RGGGCACTAACY
 C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AKGGCAMTMA-----
AAAGGTAATAAAATTT
 A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AKGGCAMTMA-----
TAAGGTAATAAAATTA
 A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AKGGCAMTMA--
AGGTCTCTAACC
 C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AKGGCAMTMA
NNATAAGGNN----
 A C G T A C G T A C G T A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AKGGCAMTMA
TNNGGGCAG---
 A C G T A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AKGGCAMTMA
TAATGGCGGNC-
 A C G T A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AKGGCAMTMA-
TATGCWAATBAV
 A C G T C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AKGGCAMTMA---
--GGTAATAAAAA
 C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AKGGCAMTMA-----
AGNGTTCTAATGANN
 C G T A C A G T A C T G A C T G G A T C G C T A G T A C A G C T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A