Information for 11-TTGGTCTAATTTGGGA (Motif 18)

A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
Reverse Opposite:
A G C T T A G C A G T C G A T C C G T A C G T A C G T A A C G T G A C T C T G A C A T G T C G A G T A C T G A C G C T A T G C A
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.666
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif60.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets45.7 +/- 26.4bp
Average Position of motif in Background49.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX4/MA0068.2/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
-----CTAATTAG---
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
----NNTAATTAGN--
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
----NNTAATTAGA--
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
----NNTAATTANN--
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGGTCTAATTTGGGA
NNTGTTTATTTTGGCA
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
-----NTAATTAG---
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
----NNTAATTAGN--
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
-----NTAATTAG---
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTGGTCTAATTTGGGA
-----TTAATTGG---
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTGGTCTAATTTGGGA
----NTTAATTAGN--
 A C G T C G A T A C T G C A T G A C G T G A T C G A C T C G T A C G T A G C A T C G A T C G A T C A T G A C T G A T C G T C G A
A C G T A C G T A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T A C G T A C G T