p-value: | 1e-12 |
log p-value: | -2.874e+01 |
Information Content per bp: | 1.680 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.16% |
Number of Background Sequences with motif | 14.9 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 41.6 +/- 24.1bp |
Average Position of motif in Background | 47.1 +/- 21.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTAAAAGTGGCTGAGG CGGTTTCAAA---------- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTAAAAGTGGCTGAGG NATTCAAAT--------- |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTAAAAGTGGCTGAGG AATTTCAAGTGGCTTN-- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTAAAAGTGGCTGAGG AAATTCAAGTGGNTTN-- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTAAAAGTGGCTGAGG AATNTTAAGTGGNTNN-- |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTAAAAGTGGCTGAGG AANTTCAAGTGGCTTN-- |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAAAAGTGGCTGAGG NANTTTCAAGTGGTTAN-- |
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YY1/MA0095.2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTAAAAGTGGCTGAGG --CAAGATGGCGGC-- |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTAAAAGTGGCTGAGG ACATCAAAGG-------- |
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MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTAAAAGTGGCTGAGG-- ---AAAWWTGCTGACWWD |
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