Information for 8-TTTTCATKAC (Motif 15)

A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C
Reverse Opposite:
T C A G G A C T T G C A G T C A A C G T A C T G G T C A C G T A C T G A G T C A
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.716
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif476.0
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets52.8 +/- 25.9bp
Average Position of motif in Background52.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TTTTCATKAC-
-NTTAATTACN
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T

Hoxd9/MA0913.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTTCATKAC
TTTTTATTGC
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTTCATKAC-
NTTTTATTACN
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

MNX1/MA0707.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTTCATKAC-
-TTTAATTANN
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T
A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

VAX2/MA0723.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTTTCATKAC
--CTAATTAC
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C
A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTTTCATKAC
--TTAATTAN
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

VAX1/MA0722.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTTTCATKAC
--CTAATTAC
 A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C
A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCATKAC----
NNAATTAATGACCNNN
 A C G T A C G T A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCATKAC---
TNAATTTTATTACCTN
 A C G T A C G T A C G T A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCATKAC----
TTTATTAATTGCNNGN
 A C G T A C G T A C G T G A C T G C A T A C G T T G A C G T C A A C G T A C G T C T G A A G T C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T